Detecting small plant peptides using SPADA (Small Peptide Alignment Discovery Application)

BMC Bioinformatics

Table 2 Novel CRP models identified by SPADA determined by manual inspection

	A. thaliana	M. truncatula
Total predictions	745	1170
Number of unannotated predictions^a	5	125
Number of novel models^b	3 (60%)	77 (62%)

^aAn unannotated prediction is a gene model predicted by SPADA but missed by current genome annotation.
^bNovel models are unannotated predictions that are manually inspected to be true members of the family with evidence from family-specific alignment and/or RNA-Seq evidence.

ISSN: 1471-2105