Skip to main content
Figure 4 | BMC Bioinformatics

Figure 4

From: zipHMMlib: a highly optimised HMM library exploiting repetitions in the input to speed up the forward algorithm

Figure 4

Dependencies between scaling factors. Dependencies between scaling factors. The square boxes are the C Ì„ o i matrices and s0,s1,s2 and s3 are scaling factors. The gray lines show the dependencies between the C Ì„ o i matrices, while the solid black arrows show how the scaling factors are computed. For example, s0 is computed directly from C Ì„ 0 as the sum of all its entries. s2 is the sum of all entries in C Ì„ 2 times s1 and s0.

Back to article page