Table 1 Location-wise distribution of full-length and Pfam-mapped protein sequences
From: Mining for class-specific motifs in protein sequence classification
| Â | SL dataset | Pfam dataset | |
|---|---|---|---|
Organelle | Code | # of protein sequences | # of Pfam sequences |
Cytoskeleton | CSK | 259 | 200 |
Cytoplasm | CYT | 3334 | 2809 |
Endoplasmic Reticulum | END | 1016 | 884 |
Extracellular | EXC | 8666 | 6393 |
Golgi apparatus | GOL | 291 | 248 |
Lysosome | LYS | 159 | 138 |
Mitochrondria | MIT | 2760 | 2383 |
Nuclear | NUC | 5104 | 4221 |
Plasma membrane | PLA | 6852 | 6155 |
Perixosome | POX | 212 | 190 |