Table 6 Sparse modules in T and K KOG categories for Homo sapien PPI network
From: A novel subgradient-based optimization algorithm for blockmodel functional module identification
KOG ID | Sparse module example | Enriched genes | Enriched GO Term | GO Level | p-value |
|---|---|---|---|---|---|
T | NTRK1, NTRK3, NTRK2 VAV1, VAV3 | NTRK1, NTRK2, NTRK3 | neurotrophin receptor activity | [+3, -1] | 2.95e-9 |
T | PIK3R3, PIK3R2, PIK3R1 | PIK3R3, PIK3R2, PIK3R1 | phosphatidylinositol 3-kinase complex | [+5, -1] | 4.77e-9 |
K | JUN, JUNB, JUND SPIB | JUN, JUNB, JUND | cellular response to calcium ion | [+6, -1] | 4.04e-7 |