Table 2 Functional annotations for Daphnia's proteome at ProRoot70 (> 100 paralogs)
From: Functional inference by ProtoNet family tree: the uncharacterized proteome of Daphnia pulex
Root ID ProRoot70 | # Daphnia proteins (ProRoot70) | # Daphnia proteins (Map10) | Ratioa | Functional groupb | ProtoName (ProRoot70) |
|---|---|---|---|---|---|
4510706 | 498 | 364 | 1.37 | Enzyme | Protein kinase |
4510983 | 279 | 155 | 1.80 | Structure | ANK repeat |
4507452 | 228 | 133 | 1.71 | Interaction | WD repeat |
4498845 | 228 | 104 | 2.19 | Enzyme | Peptidase S1A |
4508421 | 186 | 166 | 1.12 | Interaction | Classic Zinc Finger |
4490041 | 169 | 5 | 33.80 | Structure | Insect cuticle protein |
4506993 | 166 | 52 | 3.19 | Viral | RNA-dep. DNA polymerase |
4491232 | 160 | 8 | 20.00 | Receptor | Glutamate receptor-related |
4504048 | 155 | 80 | 1.94 | Receptor | 7TM GPCR, rhodopsin-like |
4510005 | 140 | 33 | 4.24 | Structure | Structural molecule activity |
4502875 | 134 | 12 | 11.17 | Interaction | Kelch related |
4510835 | 128 | 92 | 1.39 | Receptor | ABC transporter-like |
4434866 | 123 | 3 | 41.00 | Structure | Insect cuticle protein |
4504753 | 123 | 10 | 12.30 | Viral | DNA/RNA helicase |
4450084 | 114 | 2 | 57.00 | Viral | HpI Integrase; Chain A |
4510417 | 108 | 62 | 1.74 | Viral | Ribonuclease H-like |
4510284 | 104 | 53 | 1.96 | Interaction | Immunoglobulin-like |
4372467 | 102 | 5 | 20.40 | Viral | MULE transposase, domain |
4508558 | 101 | 60 | 1.68 | Interaction | RNA recognition motif, RNP-1 |