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Table 4 Average running time (linux real time converted to minutes).

From: Classification and assessment tools for structural motif discovery algorithms

 

CmFinder

RNAProfile

RNAmine

ComRNA

RNAPromo

Seed

Ref1 1

1.35

0.61

14.90

31.83

2.88

1.28

Ref2

34.87

351.99

7.14

41.28

18.12

3.81

Ref3

62.19

582.78

23.27

80.79

37.97

7.44