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Figure 2 | BMC Bioinformatics

Figure 2

From: Variant detection sensitivity and biases in whole genome and exome sequencing

Figure 2

Site level heterozygous SNP detection sensitivity for exome and whole genome sequencing samples. Sensitivity is calculated from heterozygous HapMap 3.3 positions [16] located within coding sequence as determined by Ensembl 72 [17]. 95% sensitivity is reached at per-site mapped depths of 9X for the TCGA-WGS samples, 10X for the TCGA-WXS and HGU-WXS samples, and 13X for the 1KG-WGS samples.

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