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Table 3 Detection of the viral genomes using ELM with BLASTN viruses

From: ELM: enhanced lowest common ancestor based method for detecting a pathogenic virus from a large sequence dataset

Dataset No.

Virusa

# of reads

# of contigs

Average contig length

1

Luna virus

1,518

405

454 nt

2

LCMV

573

33

117 nt

3

SAdV-49

468

11

89 nt

  1. Contigs were assembled using SSAKE v3.8.1 [19]. aLCMV, Lymphocytic choriomeningitis virus; SAdV-49, Simian adenovirus 49.
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BMC Bioinformatics

ISSN: 1471-2105

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