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Table 1 Gene expression data analyzed in this work

From: Inferring the perturbed microRNA regulatory networks from gene expression data using a network propagation based method

Dataset

Cell

miRNA

Treatment

Sample

GSE33420

CRC (DLD-1)

miR-143

Overexpression

4 case + 4ctrl

GSE18625

CRC (DLD-1)

miR-145

Overexpression

4 case + 3ctrl

GSE7754

CRC (HCT116)

miR-34a

Overexpression

2 case + 2ctrl

GSE16568

OVCA (ES-2)

miR-22

Overexpression

3 case + 3ctrl

GSE16569

OVCA (OVSAYO)

miR-30a/30d

Knockdown

3 case + 3ctrl

GSE16572

OVCA (ES-2)

miR-182

Knockdown

3 case + 3ctrl

GSE6207

HCC (HepG2)

miR-124

Overexpression

Case-ctrl, time-course (4 h, 8 h, 16 h, 24 h, 32 h, 72 h, 120 h)

GSE4107

Colonic mucosa

NA

NA

12 cancer + 10 normal