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Figure 5 | BMC Bioinformatics

Figure 5

From: ROTAS: a rotamer-dependent, atomic statistical potential for assessment and prediction of protein structures

Figure 5

Examples of the rotamer dependence of the energy terms in the ROTAS potential. (A) Disulfide bond interaction for i and j = Cys Sγ at d ij  = 2 Å, (B) hydrogen bond interaction for i = Ser O and j = Gly N at d ij  = 3 Å, (C) nonpolar interaction for i = Ile Cγ2 and j = Val Cγ1 at d ij  = 5 Å, and (D) polar interaction for i = Lys Nξ and j = Asp Oδ2 at d ij  = 7 Å.

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BMC Bioinformatics

ISSN: 1471-2105

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