Reconstruction of gene co-expression network from microarray data using local expression patterns

BMC Bioinformatics

Table 3 Short description of the datasets

Organism	Dataset	No. of genes	No. of samples	Source
Yeast Sporulation	Yeast	474	7	http://cmgm.stanford.edu/pbrown/sporulation
Yeast	Yeast KY	237	18	http://faculty.washington.edu/kayee/cluster/
Yeast	Yeast cell cycle	384	18	http://faculty.washington.edu/kayee/cluster
Human	GDS825	277	8	NCBI
Mouse	GDS958 (Subset)	4000	12	NCBI
Rat	GDS3702 (Subset)	3000	12	NCBI
Rice	Thaliana	517	13	http://homes.esat.kuleuven.be/~sistawww/bioi/thijs/Work/Clustering.html

Characteristics of different real expression datasets used for the experiments along with their sources.

ISSN: 1471-2105