Table 3 Details about the five short read datasets.
From: SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores
- | S. aureus | R. sphaeroides | Hg14 | Fish | YanHuang |
|---|---|---|---|---|---|
Fastq data size (Gbytes) | 0.684 | 0.906 | 14.2 | 425 | 495 |
Read length (bp) | 37, 101 | 101 | 101 | 101 | 80-120 |
No. of reads (million) | 4.8 | 4.1 | 62 | 1910 | 1859 |
Coverage | 90X | 90X | 70X | 192X | 57X |
Reference size (Mbp) | 2.90 | 4.60 | 88.6 | 1000 | 3000 |