Table 7 Assembly results of S.aureus and R. sphaeriodes datasets.
From: SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores
Software | S. aureus | Contigs | Â | Â | R. sphaeroides Contigs | |||
|---|---|---|---|---|---|---|---|---|
| Â | Num | N50(kb) | Errors | N50 corr. (kb) | Num | N50(kb) | Errors | N50 corr.(kb) |
Velvet | 162 | 48.4 | 28 | 41.5 | 583 | 15.7 | 35 | 14.5 |
SOAPdenovo | 107 | 288.2 | 48 | 62.7 | 204 | 131.7 | 414 | 14.3 |
ABySS | 302 | 29.2 | 14 | 24.8 | 1915 | 5.9 | 55 | 4.2 |
Ray | 221 | 36.6 | 15 | 35.6 | 752 | 11.5 | 17 | 11.2 |
SWAP-Assembler | 183 | 51.1 | 3 | 37.8 | 529 | 16.2 | 7 | 12.3 |