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Table 5 Performance Comparison of the accuracy of FAC-PIN, HC-PIN, and CNM on S. cerevisiae-2 PIN; μ = 0.5

From: The relative vertex clustering value - a new criterion for the fast discovery of functional modules in protein interaction networks

Accuracy for Modules of Size ≥ 3

Algorithms

Number of modules

Average size

Maximum size

Accuracy

    

BP

MF

CC

FAC-PIN

148

28.24

374

0.42

0.30

0.65

HC-PIN (λ = 1)

122

43.19

483

0.39

0.28

0.52

CNM

47

88.59

790

0.22

0.23

0.25

Accuracy for Modules of Size ≥ 2

FAC-PIN

232

18.8

374

0.39

0.32

0.57

HC-PIN (λ = 1)

172

23.74

483

0.37

0.30

0.44

CNM

147

29.68

790

0.09

0.15

0.21