RNA:(guanine-N2) methyltransferases RsmC/RsmD and their homologs revisited – bioinformatic analysis and prediction of the active site based on the uncharacterized Mj0882 protein structure

Table 1 Summary of the fold recognition analysis for RsmC-CTD.

Model number	Pcons score	Threading server reporting the model	PDB ace. #	PDB entry description
1	5.779	FFAS	1dus	Mj0882
2	5.46	INBGU	1dus	Mj0882
3	5.085	3DPSSM	1dus	Mj0882
4	4.701	SAM-T99	1dus	Mj0882
5	4.326	mGENTHREADER	1dus	Mj0882
6	3.271	FUGUE	1dus	Mj0882
7	3.081	FFAS	1g6q	Arg MTase Hmt1
8	3.002	SAM-T99	1g6q	Arg MTase Hmt1
9	2.994	SAM-T99	1g6q	Arg MTase Hmt1
10	2.99	SAM-T99	1f31	Arg MTase Pmt3

Hits to the Mj0882 structure are shown in bold. Comprehensive structure prediction results are available at the URL: http://bioinfo.pl/meta/target.pl?id=3972

ISSN: 1471-2105