Table 3 RIO analysis of C. elegans lactate/malate dehydrogenase family members
From: RIO: Analyzing proteomes by automated phylogenomics using resampled inference of orthologs
Sequence ID | Annotation | RIO top 1 hit (highest orthology value) | |
|---|---|---|---|
| Â | Â | Domain used for analysis: | |
| Â | Â | ldh (PF00056) | ldh_C (PF02866) |
F13D12.2 (CE02181) | LDH (predicted) | L-LDH (o = 75%, n = 61%) | L-LDH (B chain) (o = 66%, n = 23%) |
F20H11.3 (CE09512) | Member of the MDH protein family (predicted) | MDH (o = 42%, n = 16%) | MDH (o = 53%, n = 34%) |
F46E10.10 (CE20820) | Putative MDH, possible ortholog of H. sapiens Hs.75375 gene product (cytoplasmic MDH) (predicted) | cytoplasmic MDH (o = 13%, n = 95%) | MDH (o = 76%, n = 52%) |