Table 1 Comparison between SVMHC, SYFPEITHI (SYF) and HLA_BIND (HLA) of the six alleles common between them.
From: Prediction of MHC class I binding peptides, using SVMHC
Dataset | Mc | percentage correct predictions | ||||||
|---|---|---|---|---|---|---|---|---|
MHC | Length | Size | SVMHC | SYF | HLA | SVMHC | SYF | HLA |
Overall | - | - | 0.85 | 0.75 | 0.62 | 95% | 91% | 87% |
HLA-A*0201 | 9 | 113 | 0.78 | 0.77 | 0.77 | 90% | 89% | 89% |
HLA-A*0201 | 10 | 40 | 0.70 | 0.61 | 0.61 | 87% | 80% | 83% |
HLA-A1 | 9 | 28 | 0.96 | 0.93 | 0.96 | 98% | 97% | 98% |
HLA-A3 | 9 | 73 | 0.80 | 0.73 | 0.71 | 91% | 86% | 84% |
HLA-B*8 | 9 | 25 | 0.79 | 0.79 | 0.82 | 91% | 91% | 92% |
HLA-B*2705 | 9 | 29 | 1.00 | 0.92 | 0.93 | 100% | 95% | 97% |