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Table 1 Chilibot dictionary of gene/protein synonyms.

From: Content-rich biological network constructed by mining PubMed abstracts

Database

Number of gene symbols collected

SwissProt

84462

LocusLink

23924

GDB

15770

HUGO

15905

OMIM

8291

SGD

4325

  1. Flat text file versions of the six databases were downloaded from their corresponding ftp sites. Synonym pairs were extracted from the corresponding fields and entries with the same symbol from the six databases were then combined in a case insensitive manner. (HUGO: Human Genome Organization; OMIM: Online Mendelian Inheritance in Man; SGD: Saccharomyces Genome Database)
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BMC Bioinformatics

ISSN: 1471-2105

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