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Table 1 Time study over 3.224 GBases using randomly obtained sequences

From: Refined repetitive sequence searches utilizing a fast hash function and cross species information retrievals

Query Length (Bases)

Average Search Time (Seconds)

Average Number of Hits

4

56.40

15,428,878

8

1.147

98,141

12

2.254

2308

16

2.235

121

32

2.451

1.55

64

2.517

1.15

128

2.648

1.07

256

2.956

1.03

512

3.598

1.01

1024

4.738

1.01

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BMC Bioinformatics

ISSN: 1471-2105

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