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Table 4 Comparison of two microarray data sets at gene set level

From: PAGE: Parametric Analysis of Gene Set Enrichment

 

GDS 287

GDS 472

Gene Set

Z score

p-value

Z score

p-value

mRNA processing

4.0322

0.0001

3.2288

0.0012

cell cycle

3.0715

0.0021

3.1127

0.0019

mRNA catabolism

2.2233

0.0262

2.9762

0.0029

mRNA splicing

5.9613

3.00E-09

2.8041

0.0050

nuclear mRNA splicing_via spliceosome

6.3123

2.75E-10

2.6642

0.0077

regulation of cyclin dependent protein kinase activity

2.1343

0.0328

2.5703

0.0102

G1 phase of mitotic cell cycle

2.5482

0.0108

2.5361

0.0112

negative regulation of cell proliferation

3.0116

0.0026

2.0812

0.0374

cholesterol metabolism

2.2758

0.0229

2.0312

0.0422

blood coagulation

-2.6705

0.0076

-2.0119

0.0442

protein folding

-2.1739

0.0297

-2.1045

0.0353

regulation of blood pressure

-3.0984

0.0019

-2.3543

0.0186

carboxylic acid transport

-2.9366

0.0033

-2.8088

0.0050

signal transduction

-2.5917

0.0095

-3.0115

0.0026

glycolysis

-4.0631

4.84E-05

-5.3157

1.06E-07

tricarboxylic acid cycle

-2.2914

0.0219

-6.3019

2.94E-10

electron transport

-3.9150

0.0001

-6.9442

3.81E-12