Table 1 PANTHER annotation versus disseminated annotation releases 1 & 2. The data from the Supplementary Files 1 & 2 were submitted to the PANTHER website either using the probe IDs or the gene IDs. The differences in identification, display, and absentee calls, between the datasets and the annotation releases are due to the fact that PANTHER is continuously updated, only considers protein coding genes, excludes GenBank-only annotated mRNAs, and retains only the gene ID with the highest suffix.
Number of unique entries ~ | ||||||
|---|---|---|---|---|---|---|
Annotation Version | Probe ID/Gene ID set | submitted | found by PANTHER | displayed by PANTHER | not found by PANTHER | not accounted for |
V1 | Probe ID | 51 | 30 | 29 | 21 | 0 |
Gene ID | 51 | 44 | 22 | 2 | 5 | |
V2 | Probe ID | 110 | 65 | 59 | 45 | 0 |
Gene ID | 110 | 98 | 44 | 0 | 12 | |