Table 1 Summary of antisense target genes and their predicted structures used in this study
From: Selection of antisense oligonucleotides based on multiple predicted target mRNA structures
Accession | Description | No. structures | No. ODNs |
|---|---|---|---|
X62295 | Rattus mRNA for vascular type-1 angiotensin II receptor. | 50 | 36 |
XM_051583 | Homo sapiens v-raf-1 murine leukemia viral oncogene homolog 1 (RAF1), mRNA | 50 | 31 |
M14758 | Homo sapiens P-glycoprotein (PGY1) mRNA | 50 | 22 |
NM_004996 | Homo sapiens ATP-binding cassette, sub-family C (CFTR/MRP), member 1 (ABCC1), transcript variant 1, mRNA | 50 | 14 |
M24283 | Human intercellular adhesion molecule-1 (ICAM-1) | 50 | 66 |
X52479 | Human PKC alpha mRNA for protein kinase C alpha | 37 | 19 |
NM_001078 | Homo sapiens vascular cell adhesion molecule 1 (VCAM1), transcript variant 1, mRNA | 50 | 35 |
XM_057446 | Homo sapiens selectin E (endothelial adhesion molecule 1) (SELE), mRNA. | 50 | 11 |
M30640 | Human endothelial leukocyte adhesion molecule I (ELAM1) mRNA, complete cds | 50 | 4 |
NM_000877 | Homo sapiens interleukin 1 receptor, type I (IL1R1), mRNA. | 50 | 20 |
M31585 | Mouse (clone lambda-c5e) intercellular adhesion molecule 1 (ICAM-1) mRNA, complete cds | 39 | 8 |
BC036531 | Homo sapiens collagen, type I, alpha 1, mRNA (cDNA clone MGC:33668 IMAGE:5264710) | 50 | 19 |
NM_010784 | Mus musculus midkine (Mdk), mRNA | 17 | 4 |
M15077 | P.pyralis (firefly) luciferase gene, complete cds | 39 | 8 |
X03484 | Human mRNA for raf oncogene | 50 | 20 |
X14805 | Mus musculus mRNA for DNA methyltransferase 1 | 50 | 8 |
BC005976 | Homo sapiens ras homolog gene family, member A, mRNA | 23 | 13 |
M10843 | Rabbit beta-globin mRNA | 26 | 24 |
U45880 | Human X-linked inhibitor of apotosis protein XIAP mRNA | 36 | 6 |
AF015950 | Human telomerase reverse transcriptase mRNA | 50 | 5 |
NR_001566 | Homo sapiens telomerase RNA component (TERC) on chromosome 3 | 23 | 5 |
M34309 | Human epidermal growth factor receptor (HER3) mRNA, complete cds. | 50 | 22 |
NM_004507 | Homo sapiens HUS1 checkpoint homolog (S. pombe) (HUS1), mRNA. | 33 | 11 |
AJ278710 | Escherichia coli 23S rRNA gene, strain K12 DSM 30083T | 50 | 7 |
X03363 | Human c-erb-B-2 mRNA | 50 | 3 |
M10988 | Human tumor necrosis factor (TNF) mRNA | 26 | 4 |
NM_000791 | Homo sapiens dihydrofolate reductase (DHFR), mRNA. | 50 | 7 |
NM_001168 | Homo sapiens baculoviral IAP repeat-containing 5 (survivin) (BIRC5), mRNA | 29 | 5 |
NM_013642 | Mus musculus dual specificity phosphatase 1 (Dusp1), mRNA | 37 | 8 |
AF025846 | Co-reporter vector pRL-TK, complete sequence | 50 | 4 |