Figure 4

The effect of cp _in on clustering. Twenty sets of non-overlapping clusters are generated from the yeast PPI using cp _in = 0.1, 0.3, 0.5, 0.7, 0.9 and for each of these values of cp _in using d _in = 0.1, 0.6, 0.7, 0.9. We then calculated and plotted (a) the total number of clusters, (b) the number of clusters of size ≥ 3, (c) the average size of the clusters of size ≥ 3, and (d) the size of the biggest cluster with respect to cp _in .