Table 4 TFBS V$AP1_Q4_01 prediction. Comparison of OMiMa (1-L-0/1-C-0), PWM, 1stMM, and PVLMM (order 1 and depth 1) for AP1 TFBS prediction. The performance results are the average values of 10-fold cross validation.
From: Optimized mixed Markov models for motif identification
Model | Sn | Sp | Mc |
|---|---|---|---|
PWM | 0.857 | 0.997 | 0.860 |
1stMM | 0.839 | 0.998 | 0.870 |
PVLMM | 0.789 | 0.999 | 0.847 |
1-L-0 | 0.866 | 0.998 | 0.882 |
1-C-0 | 0.874 | 0.998 | 0.884 |