From: Identification of QTLs controlling gene expression networks defined a priori
Abbreviationa | Network Biological Description | # Genesb | # Cis QTLc | Referenced |
---|---|---|---|---|
BD | Genes down regulated by Botrytis | 6 | 0 | Unpublished (Kliebenstein) |
BU | Genes up regulated by Botrytis | 10 | 0 | Unpublished (Kliebenstein) |
CM | Camalexin biosynthetic pathway | 7 | 1 | [55] |
CL | Genes involved in Photosynthesis | 27 | 1 | ABRC |
FV | Flavonoid biosynthetic pathway | 15 | 1 | [19, 56] |
FVTFe | Transcription Factors for FV | 6 | 3 | [57] |
GS | Glucosinolate biosynthetic pathway | 20 | 6 | [18, 19] |
LG | Lignin Production | 43 | 11 | [58] and this work |
LGB | Lignin Production | 9 | 1 | [58] and this work |
MT | Methionine biosynthetic pathway | 5 | 0 | ABRC and this work |
MTB | Methionine biosynthetic pathway | 5 | 1 | ABRC and this work |
PH | Phenylalanine biosynthetic pathway | 11 | 5 | ABRC |
SN | Sinapate biosynthetic pathway | 3 | 0 | [59] |
TP | Tryptophan biosynthetic pathway | 9 | 2 | [60] |
WC | Wound-inducible genes controlled by COI1 | 7 | 1 | [33] Net. C |
WNM | Wound-inducible genes, no MeJA | 4 | 0 | [33] Net. G |
WNC | Wound-inducible genes, not controlled by COI1 | 8 | 1 | [33] Net. D |
IC | Insect-inducible genes controlled by COI1 | 14 | 1 | [33] Net. A |
INC | Insect-inducible genes, not controlled by COI1 | 13 | 0 | [33] Net. B |
ND | SA-inducible genes controlled by NPR1 | 7 | 0 | [34] |
NS | SA-inducible secretory genes controlled by NPR1 | 16 | 3 | [34] |