Table 7 The statistics of the property patterns with three identical residues in the ordered and disordered regions
From: Protein disorder prediction by condensed PSSM considering propensity for order or disorder
Patterns | # of matches in # subsequences | Score | ||||
|---|---|---|---|---|---|---|
| Â | In ordered regions | In disordered regions | Â | Â | ||
| Â | # matches | # seqs | # matches | # seqs | S o | S d |
[Hydrophobic] [Hydrophobic] [Hydrophobic] | 71229 | 2087 | 16534 | 1555 | 0.56 | 0.44 |
[Hydrophobic O ] [Hydrophobic O ] [Hydrophobic O ] | 14608 | 1746 | 2297 | 687 | 0.65 | 0.35 |
[Hydrophobic D ] [Hydrophobic D ] [Hydrophobic D ] | 4766 | 1224 | 2649 | 789 | 0.35 | 0.65 |
[Polar] [Polar] [Polar] | 38084 | 1965 | 16390 | 1585 | 0.41 | 0.59 |
[Polar O ] [Polar O ] [Polar O ] | 2530 | 927 | 762 | 372 | 0.50 | 0.50 |
[Polar D ] [Polar D ] [Polar D ] | 8808 | 1459 | 5705 | 1060 | 0.31 | 0.69 |
[Small] [Small] [Small] | 37886 | 1949 | 15577 | 1630 | 0.42 | 0.58 |
[Small O ] [Small O ] [Small O ] | 2050 | 824 | 569 | 284 | 0.52 | 0.48 |
[Small D ] [Small D ] [Small D ] | 9742 | 1504 | 5662 | 1169 | 0.34 | 0.66 |
[Aromatic] [Aromatic] [Aromatic] | 467 | 302 | 54 | 47 | 0.72 | 0.28 |
[Aromatic O ] [Aromatic O ] [Aromatic O ] | 219 | 159 | 20 | 17 | 0.76 | 0.24 |
[Aromatic D ] [Aromatic D ] [Aromatic D ] | 5 | 5 | 4 | 4 | 0.27 | 0.73 |