Figure 4
From: MIMOX: a web tool for phage display based epitope mapping
Comparison of three mapping results. MIMOX was used to map LLTTNKD to HIV gp120 with three different methods. The top result using the default parameters is shown in image A. It is composed of the residues: L452 L453 T283 T455 N280 K282 D279 and has a 265.82 Å2 solvent accessible surface. The top result from conservative mode is shown in image B. It is composed of the residues: I360 I467 S465 T358 N356 K357 E464, with a 399.28 Å2 surface area. Image C shows the top result from the all heavy atoms method. It is composed of the residues: L86 V85 T244 S243 N229 K231 E267 and has an even larger accessible surface area of 562.89 Å2.