From: A comparative analysis of the information content in long and short SAGE libraries
LongSAGE Tag | Start and end of matched location | No. of matched basepairs | Gene ID | Description of the sequence matched to the tag |
---|---|---|---|---|
AAATATCCAGAATAGGC | 2-21 | 20 | XM_378567.1 | PREDICTED: Homo sapiens hypothetical LOC400505 (LOC400505), mRNA |
CCAGCCGGGGTGACAGA | 5-21 | 17 | NM_000791.3 | Homo sapiens dihydrofolate reductase (DHFR), mRNA |
CCAGCCGGGGTGACAGA | 5-21 | 17 | NM_001874.3 | Homo sapiens carboxypeptidase M (CPM), transcript variant 1, mRNA |
CCAGCCGGGGTGACAGA | 5-21 | 17 | NM_024080.3 | Homo sapiens transient receptor potential cation channel, subfamily M, member 8 (TRPM8), mRNA |
CCAGTCTGGGCAACAAG | 5-21 | 17 | NM_017437.1 | Homo sapiens cleavage and polyadenylation specific factor 2, 100kDa (CPSF2), mRNA |
CCAGTCTGGGCAACAAG | 5-21 | 17 | NM_181776.1 | Homo sapiens solute carrier family 36 (proton/amino acid symporter), member 2 (SLC36A2), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_000641.2 | Homo sapiens interleukin 11 (IL11), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_000997.3 | Homo sapiens ribosomal protein L37 (RPL37), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_001009899.1 | Homo sapiens KIAA2018 (KIAA2018), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_001032999.1 | Homo sapiens core-binding factor, runt domain, alpha subunit 2; translocated to, 2 (CBFA2T2), transcript variant 3, mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_001033564.1 | Homo sapiens hypothetical protein LOC619208 (LOC619208), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_007042.1 | Homo sapiens ribonuclease P 14kDa subunit (RPP14), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | NM_030579.1 | Homo sapiens outer mitochondrial membrane cytochrome b5 (CYB5-M), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | XM_371492.2 | PREDICTED: Homo sapiens similar to signal-transducing adaptor protein-2; brk kinase substrate (LOC388949), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | XM_379458.2 | PREDICTED: Homo sapiens hypothetical LOC401287 (LOC401287), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | XM_499056.1 | PREDICTED: Homo sapiens hypothetical gene supported by AK127523 (LOC441190), mRNA |
CCTGGCACTTTGGGAGG | 5-21 | 17 | XM_499503.1 | PREDICTED: Homo sapiens hypothetical gene supported by AK127523 (LOC442499), mRNA |
GACTGGAGGTGTGGGGA | 4-21 | 18 | NM_014636.1 | Homo sapiens Ral GEF with PH domain and SH3 binding motif 1 (RALGPS1), mRNA |
GGTGAGTGGGACCCAGG | 1-21 | 21 | NM_012289.3 | Homo sapiens kelch-like ECH-associated protein 1 (KEAP1), transcript variant 2, mRNA |
GTGCTGGGATAACTGGC | 4-21 | 18 | XM_499182.1 | PREDICTED: Homo sapiens hypothetical gene supported by AK128305 (LOC441501), mRNA |
GTGCTGGGATAACTGGC | 5-21 | 17 | NM_005431.1 | Homo sapiens X-ray repair complementing defective repair in Chinese hamster cells 2 (XRCC2), mRNA |
GTGCTGGGATAACTGGC | 5-21 | 17 | NM_016094.2 | Homo sapiens COMM domain containing 2 (COMMD2), mRNA |
GTGCTGGGATAACTGGC | 5-21 | 17 | XM_374973.1 | PREDICTED: Homo sapiens similar to hypothetical protein (L1H 3 region) - human (LOC400025), mRNA |
GTGGGTCCTCGGGTTGG | 1-21 | 21 | NM_194286.2 | Homo sapiens KIAA1853 protein (KIAA1853), mRNA |
TGGTACACACCTGTAGT | 4-21 | 18 | NM_001008528.1 | Homo sapiens matrix-remodelling associated 7 (MXRA7), transcript variant 1, mRNA |
TGGTACACACCTGTAGT | 4-21 | 18 | NM_152920.1 | Homo sapiens egf-like module containing, mucin-like, hormone receptor-like 2 (EMR2), transcript variant 6, mRNA |
TGGTACACACCTGTAGT | 5-21 | 17 | NM_014573.1 | Homo sapiens hypothetical protein MAC30 (MAC30), mRNA |