From: Effect of various normalization methods on Applied Biosystems expression array system data
TP | TP rate | TN | FP | FDR | FN | |
---|---|---|---|---|---|---|
TaqMan | 2283 | 0 | 261 | 0 | 0 | 0 |
Quantile | 1415 | 61.98 | 140 | 101 | 7.14 | 888 |
Median | 1374 | 60.18 | 142 | 99 | 7.79 | 929 |
Scale | 1354 | 59.31 | 144 | 97 | 7.76 | 949 |
VSN | 1393 | 61.02 | 142 | 99 | 7.69 | 910 |
Loess | 1402 | 61.41 | 139 | 102 | 7.84 | 901 |