| CPU time (seconds) |
---|
FASeg | 181 |
aCGH | 107 |
DNAcopy | 18 |
GLAD | 98 |
Picard | 101 |
RJaCGH | 13778 |
BioHMM | 1619 |
- * Comparison was made in R 2.4.1 on a desktop computer running the Windows XP® operating system. CPU: AMD Athlon 64 3800+ @ 2.4 GHz; RAM: 1.2 Gb. The CPU time for the tumor sample CZ T26 was reported. For FASeg, aCGH, DNAcopy and GLAD, the ten parameters listed in Table 1 were tested and the average CPU time was reported. For Picard, ten maxSeg values between 2 and 20 were tested and the average CPU time was reported. For RJaCGH and BioHMM, the parameters listed in Table 1 were used.