Skip to main content
Figure 4 | BMC Bioinformatics

Figure 4

From: Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and information theory

Figure 4

Comparison of observed (solid line) and predicted microarray data for genes 1–4 (see Table 1). Triangles indicate the best microarray fit when there are four mistakes in TRN (the first four entries in the upper left diagonal for genes 1–4); squares indicate the best microarray fit when we allow our program to correct the network. This shows that our algorithm is not only able to calculate the TF time courses, binding constants, etc.; it can also be used as a tool to decide whether a TF is up or down regulating a gene.

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us