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Table 5 Comparisons of of several methods in term of RMSE and training time on Krogan's yeast extended dataset

From: Analysis on multi-domain cooperation for predicting protein-protein interactions

 

EM

ASSOC

ASNM

LPM

APMM

Train

     

1st

0.4156

0.4525

0.4580

0.1262

0.1359

2nd

0.4176

0.4521

0.4607

0.1248

0.1360

3rd

0.4196

0.4548

0.4615

0.1291

0.1365

4th

0.4178

0.4535

0.4585

0.1243

0.1337

5th

0.4184

0.4546

0.4602

0.1256

0.1338

Average

0.4178

0.4535

0.4598

0.1260

0.1352

Time (seconds)

2699.9

0.2000

0.1968

118.21

6.5092

Test

     

1st

0.5504

0.5548

0.4931

0.3967

0.3588

2nd

0.5390

0.5441

0.4906

0.3804

0.3407

3rd

0.5372

0.5407

0.4822

0.3687

0.3372

4th

0.5422

0.5364

0.4805

0.3854

0.3366

5th

0.5333

0.5291

0.4747

0.3907

0.3455

Average

0.5404

0.5410

0.4842

0.3844

0.3437