From: Application of amino acid occurrence for discriminating different folding types of globular proteins
 | Number | Ratio | Sensitivity | Precision | F1 | |||
---|---|---|---|---|---|---|---|---|
Fold Description | Â | [%] | wo | w | wo | w | wo | w |
Cytochrome C | 16 | 3 | 56 | 94 | 64 | 47 | 60 | 63 |
DNA/RNA binding 3-helical bundle | 32 | 6 | 75 | 56 | 41 | 47 | 53 | 51 |
Four helical up and down bundle | 15 | 3 | 33 | 33 | 71 | 42 | 45 | 37 |
EF hand-like fold | 15 | 3 | 53 | 53 | 57 | 42 | 55 | 47 |
Immunoglobulin-like β-sandwich | 74 | 14 | 66 | 31 | 44 | 68 | 53 | 43 |
Cupredoxin-like | 21 | 4 | 29 | 38 | 50 | 33 | 36 | 36 |
Concanavalin A-like lectins/glucanases | 13 | 2 | 38 | 38 | 42 | 33 | 40 | 36 |
SH3-like barrel | 16 | 3 | 0 | 50 | - | 44 | - | 47 |
OB-fold | 32 | 6 | 16 | 28 | 26 | 31 | 20 | 30 |
TIM barrel | 77 | 14 | 40 | 25 | 66 | 70 | 50 | 37 |
FAD/NAD: (P)-binding domain | 23 | 4 | 22 | 30 | 114 | 50 | 37 | 38 |
Flavodoxin-like | 24 | 5 | 8 | 13 | 28 | 35 | 13 | 18 |
NAD: (P)-binding Rossmann-fold domains | 40 | 8 | 40 | 35 | 5 | 8 | 8 | 13 |
P-loop containing nucleoside triphosphate hydrolases | 22 | 4 | 23 | 18 | 38 | 50 | 29 | 27 |
Thioredoxin fold | 17 | 3 | 18 | 35 | 33 | 25 | 23 | 29 |
Ribonuclease H-like motif | 22 | 4 | 5 | 18 | 14 | 22 | 7 | 20 |
α/β-Hydrolases | 18 | 3 | 33 | 39 | 43 | 41 | 38 | 40 |
β-Grasp, ubiquitin-like | 15 | 3 | 0 | 33 | 0 | 20 | - | 25 |
Ferredoxin-like | 40 | 8 | 23 | 3 | 11 | 10 | 15 | 4 |
Total/Mean | 532 | Â | 31 | 35 | 42 | 38 | 34 | 34 |
Accuracy | Â | Â | Â | Â | Â | Â | Â | Â |
without reweighting | 36 | Â | Â | Â | Â | Â | Â | Â |
with reweighting | 32 | Â | Â | Â | Â | Â | Â | Â |