Table 4 Comparison of results obtained from the 2 algorithms described here with SSM
From: Comparison of protein structures by growing neighborhood alignments
Data set/classifin. | Alignment of sequence nbhd. Better/Worse/Level | Alignment of structure nbhd. Better/Worse/Level |
|---|---|---|
Fischer's | 13/10/45 | 23/5/40 |
Novotny's | Â | Â |
1.10.164 | 3/1/6 | 4/0/6 |
1.10.40 | 9/0/12 | 8/0/13 |
1.25.30 | 9/0/12 | 3/0/18 |
2.30.110 | 1/1/4 | 1/1/4 |
2.40.100 | 1/0/27 | 2/1/25 |
2.100.10 | 1/4/10 | 3/1/11 |
3.10.70 | 2/0/8 | 3/0/7 |
3.40.91 | 2/0/4 | 1/0/5 |
3.70.10 | 0/1/14 | 1/2/12 |
2.40.20 | 0/6/15 | 3/2/16 |