From: Extracting unrecognized gene relationships from the biomedical literature via matrix factorizations
 |  | Entrez Gene ID | The number of PubMed citations | |||||
---|---|---|---|---|---|---|---|---|
Symbol | Gene description | Human | Mouse | Rat | Human | Mouse | Rat | Total |
A2M | alpha-2-macroglobulin | 2 | 232345 | 24153 | 10 | 10 | 10 | 30 |
ABL1 | v-abl Abelson murine leukemia viral oncogene homolog 1 | 25 | 11350 | 311860 | 10 | 10 | 4 | 24 |
APBA1 | amyloid beta precursor protein-binding, family A, member 1 | 320 | 108119 | 83589 | 10 | 2 | 6 | 18 |
APBB1 | amyloid beta precursor protein-binding, family B, member 1 | 322 | 11785 | 29722 | 10 | 10 | 7 | 27 |
APLP1 | amyloid beta precursor-like protein 1 | 333 | 11803 | 29572 | 10 | 10 | 2 | 22 |
APLP2 | amyloid beta precursor-like protein 2 | 334 | 11804 | 25382 | 10 | 10 | 5 | 25 |
APOE | apolipoprotein E | 348 | 11816 | 25728 | 10 | 10 | 8 | 28 |
APP | amyloid beta precursor protein | 351 | 11820 | 54226 | 10 | 10 | 10 | 30 |
ATOH1 | atonal homolog 1 (Drosophila) | 474 | 11921 | - | 6 | 10 | - | 16 |
BRCA1 | breast cancer 1, early onset | 672 | 12189 | 24227 | 10 | 10 | 6 | 26 |
BRCA2 | breast cancer 2, early onset | 675 | - | 25082 | 10 | - | 3 | 13 |
CDK5 | cyclin-dependent kinase 5 | 1020 | 12568 | 140908 | 10 | 10 | 10 | 30 |
CDK5R1 | cyclin-dependent kinase 5, regulatory subunit 1 (p35) | 8851 | 12569 | 116671 | 10 | 10 | 10 | 30 |
CDK5R2 | cyclin-dependent kinase 5, regulatory subunit 2 (p39) | 8941 | 12570 | - | 10 | 10 | - | 20 |
DAB1 | disabled homolog 1 (Drosophila) | 1600 | 13131 | 266729 | 10 | 10 | 4 | 24 |
DLL1 | delta-like 1 (Drosophila) | 28514 | 13388 | 84010 | 10 | 10 | 2 | 22 |
DNMT1 | DNA (cytosine-5-)-methyltransferase 1 | 1786 | 13433 | 84350 | 10 | 10 | 3 | 23 |
EGFR | epidermal growth factor receptor | 1956 | 13649 | 24329 | 10 | 10 | 10 | 30 |
ERBB2 | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2 | 2064 | 13866 | 24337 | 10 | 10 | 10 | 30 |
ETS1 | v-ets erythroblastosis virus E26 oncogene homolog 1 | 2113 | 23871 | 24356 | 10 | 10 | 10 | 30 |
FOS | v-fos FBJ murine osteosarcoma viral oncogene homolog | 2353 | 14281 | 24371 | 10 | 10 | 10 | 30 |
FYN | FYN oncogene related to SRC, FGR, YES | 2534 | 14360 | 25150 | 10 | 10 | 10 | 30 |
GLI | glioma-associated oncogene homolog 1 | 2735 | 14632 | 140589 | 10 | 10 | 1 | 21 |
GLI2 | GLI-Kruppel family member GLI2 | 2736 | 14633 | - | 10 | 10 | - | 20 |
GLI3 | GLI-Kruppel family member GLI3 | 2737 | 14634 | 140588 | 10 | 10 | 1 | 21 |
JAG1 | jagged 1 (Alagille syndrome) | 182 | 16449 | 29146 | 10 | 10 | 5 | 25 |
KIT | feline sarcoma viral oncogene homolog | 3815 | 16590 | 64030 | 10 | 10 | 8 | 28 |
LRP1 | low density lipoprotein-related protein 1 | 4035 | 16971 | - | 10 | 10 | - | 20 |
LRP8 | low density lipoprotein receptor-related protein 8 | 7804 | 16975 | - | 10 | 10 | - | 20 |
MAPT | microtubule-associated protein tau | 4137 | 17762 | 29477 | 10 | 10 | 10 | 30 |
MYC | v-myc myelocytomatosis viral oncogene homolog (avian) | 4609 | 17869 | 24577 | 10 | 10 | 10 | 30 |
NOTCH1 | Notch homolog 1, translocation-associated (Drosophila) | 4851 | 18128 | 25496 | 10 | 10 | 10 | 30 |
NRAS | neuroblastoma RAS viral (v-ras) oncogene homolog | 4893 | 18176 | 24605 | 10 | 10 | 6 | 26 |
PAX2 | paired box gene 2 | 5076 | 18504 | - | 10 | 10 | - | 20 |
PAX3 | paired box gene 3 (Waardenburg syndrome 1) | 5077 | 18505 | 114502 | 10 | 10 | 2 | 22 |
PSEN1 | presenilin 1 (Alzheimer disease 3) | 5663 | 19164 | 29192 | 10 | 10 | 10 | 30 |
PSEN2 | presenilin 2 (Alzheimer disease 4) | 5664 | 19165 | 81751 | 10 | 10 | 10 | 30 |
PTCH | patched homolog (Drosophila) | 5727 | 19206 | 89830 | 10 | 10 | 3 | 23 |
RELN | reelin | 5649 | 19699 | 24718 | 10 | 10 | 10 | 30 |
ROBO1 | roundabout, axon guidance receptor, homolog 1 | 6091 | 19876 | 58946 | 10 | 10 | 2 | 22 |
SHC1 | Src homology 2 domain containing transforming protein 1 | 6464 | 20416 | 85385 | 10 | 10 | 10 | 30 |
SHH | sonic hedgehog homolog (Drosophila) | 6469 | 20423 | 29499 | 10 | 10 | 10 | 30 |
SMO | smoothened homolog (Drosophila) | 6608 | 20596 | - | 10 | 9 | - | 19 |
SRC | v-src sarcoma viral oncogene homolog | 6714 | 20779 | 83805 | 10 | 10 | 10 | 30 |
TGFB1 | transforming growth factor, beta 1 | 7040 | 21803 | 59086 | 10 | 10 | 10 | 30 |
TP53 | tumor protein p53 (Li-Fraumeni syndrome) | 7157 | 22059 | 24842 | 10 | 10 | 10 | 30 |
VLDLR | very low density lipoprotein receptor | 7436 | 22359 | 25696 | 10 | 10 | 5 | 25 |
WNT1 | wingless-type MMTV integration site family, member 1 | 7471 | 22408 | 24881 | 10 | 10 | 5 | 25 |
WNT2 | wingless-type MMTV integration site family member 2 | 7472 | 22413 | 114487 | 10 | 10 | 6 | 26 |
WNT3 | wingless-type MMTV integration site family, member 3 | 7473 | 22415 | 24882 | 8 | 10 | 4 | 22 |