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Table 2 Global statistics of genomic sequences in Leishmania infantum.

From: Improving the prediction of mRNA extremities in the parasitic protozoan Leishmania

 

Genomic Poly(A)

Random Genomic

 

A

T

C

G

YY

A

T

C

G

YY

Average

20.3

25.6

34.1

29.3

29.1

20.1

20.2

29.7

30.0

24.1

Median

20.8

25.7

34.0

28.6

29.6

20.0

20.4

29.7

30.0

24.2

Standard Deviation

3.8

2.7

2.6

2.8

4.0

1.0

1.0

1.0

1.0

1.1

  1. Values are derived from 218 sequences of 1601 nucleotides and represent the canonical DNA bases in addition to pyrimidine dinucleotides (YY). The genomic poly(A) sequences encompass 800 nucleotides surrounding the mapped poly(A) site. As a control, 218 genomic regions were selected at random via an ad-hoc JAVA script.
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BMC Bioinformatics

ISSN: 1471-2105

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