From: Accelerating String Set Matching in FPGA Hardware for Bioinformatics Research
 | Bit encoding of selected peptides | ||||
---|---|---|---|---|---|
Peptide | 4 | 3 | 2 | 1 | 0 |
A | 0 | 0 | 0 | 0 | 0 |
C | 0 | 0 | 0 | 1 | 0 |
D | 0 | 0 | 0 | 1 | 1 |
E | 0 | 0 | 1 | 0 | 0 |
... | ... | ... | ... | ... | ... |
M | 0 | 1 | 1 | 0 | 1 |
... | ... | ... | ... | ... | ... |
Y | 1 | 1 | 0 | 0 | 1 |