From: Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Code | COGs | PREDICTED BEA | PREDICTED HIERARCHICAL | PREDICTED K-MEANS | PREDICTED PAM |
---|---|---|---|---|---|
Information storage and processing | Â | Â | Â | Â | Â |
J | 217 | 213 | 321 | 544 | 754 |
K | 132 | 122 | 4 | 0 | 0 |
L | 184 | 181 | 39 | 0 | 0 |
Cellular processes | Â | Â | Â | Â | Â |
D | 32 | 32 | 0 | 0 | 0 |
O | 110 | 104 | 26 | 0 | 0 |
M | 155 | 153 | 140 | 84 | 0 |
N | 133 | 130 | 46 | 81 | 100 |
P | 160 | 149 | 10 | 0 | 0 |
T | 97 | 83 | 0 | 0 | 0 |
Metabolism | Â | Â | Â | Â | Â |
C | 224 | 220 | 65 | 24 | 0 |
G | 171 | 164 | 17 | 197 | 62 |
E | 233 | 226 | 584 | 260 | 312 |
F | 85 | 83 | 18 | 0 | 0 |
H | 154 | 141 | 49 | 0 | 0 |
I | 75 | 72 | 0 | 0 | 0 |
Q | 62 | 55 | 0 | 0 | 0 |
Poorly characterized | Â | Â | Â | Â | Â |
R | 449 | 431 | 113 | 250 | 0 |
S | 750 | 748 | 1875 | 1867 | 2079 |