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Figure 3 | BMC Bioinformatics

Figure 3

From: Predicting protein folding pathways at the mesoscopic level based on native interactions between secondary structure elements

Figure 3

Algorithm SSFold to predict the most energetically favorable interaction order of SSEs that corresponds to a folding pathway. Each iteration corresponds to a conformational change that results from a new pair of interactions. Within a folded structure, a turn is included in the energy computations only when adjacent SSEs are included in the structure.

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BMC Bioinformatics

ISSN: 1471-2105

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