From: Critical assessment of alignment procedures for LC-MS proteomics and metabolomics measurements
 | msInspect | MZmine | OpenMS | SpecArray | XAlign | XCMS | |
---|---|---|---|---|---|---|---|
 |  |  |  |  |  | without retention time | with correction |
fraction 00 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.52 | 0.75 | 0.86 | 0.61 | 0.82 | 0.72 | 0.62 |
PrecisionAlign | 0.38 | 0.81 | 0.86 | 0.61 | 0.82 | 0.54 | 0.58 |
fraction 20 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.56 | 0.87 | 0.92 | 0.62 | 0.85 | 0.88 | 0.81 |
PrecisionAlign | 0.45 | 0.88 | 0.92 | 0.62 | 0.85 | 0.84 | 0.80 |
fraction 40 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.63 | 0.87 | 0.94 | 0.75 | 0.87 | 0.92 | 0.81 |
PrecisionAlign | 0.48 | 0.90 | 0.94 | 0.75 | 0.87 | 0.85 | 0.80 |
fraction 60 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.73 | 0.79 | 0.96 | 0.71 | 0.87 | 0.91 | 0.78 |
PrecisionAlign | 0.54 | 0.84 | 0.96 | 0.71 | 0.87 | 0.80 | 0.75 |
fraction 80 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.70 | 0.92 | 0.96 | 0.74 | 0.90 | 0.94 | 0.89 |
PrecisionAlign | 0.57 | 0.94 | 0.96 | 0.74 | 0.90 | 0.88 | 0.88 |
fraction 100 | Â | Â | Â | Â | Â | Â | Â |
RecallAlign | 0.82 | 0.92 | 0.94 | 0.77 | 0.96 | 0.95 | 0.96 |
PrecisionAlign | 0.56 | 0.94 | 0.94 | 0.77 | 0.96 | 0.89 | 0.96 |