Protein family | Refined | (TO) | Basic statistics | Evaluation statistics |
---|
| | | TP | FP | TN | FN | PPV | MCC |
---|
HBB
| 2 | (9) | 2 | 0 | 17 | 0 | 100.00 | 1.00 |
HOX
| 30 | (41) | 30 | 0 | 3853 | 0 | 100.00 | 1.00 |
SMm
| 12 | (17) | 12 | 0 | 22 | 0 | 100.00 | 1.00 |
SMc
| 6 | (6) | 6 | 0 | 5 | 0 | 100.00 | 1.00 |
NR
| 4 | (29) | 1 | 1 | 327 | 3 | 50.00 | 0.35 |
All
| 54 | (102) | 51 | 1 | 4224 | 3 | 98.08 | 0.96 |
- Protein family: the protein family being examined; TO pairings: the number of TO pairs in the Hulsen dataset (including many-to-many orthologous pairings and non-UniProtKB/Swiss-Prot proteins); Refined pairings: the number of one-to-one TO pairings tested after refinement of Hulsen TO dataset; Basic statistics: the basic counts of true positives (TP), false positives (FP), true negatives (TN), false negatives (FN); Evaluation statistics: the PPV (positive predictive value, TP/(TP + FP)), and the MCC (Matthews Correlation Coefficient), all rounded to 2dp)