Finding microRNA regulatory modules in human genome using rule induction

BMC Bioinformatics

Table 5 Overview of the original datasets used in this paper

Dataset	Content	Amount	Reference
1	miRNA-target binding information	230 miRNAs 2410 mRNAs	Krek et al. [12]
2	microRNA expression profiles	217 miRNAs 89 samples	Lu et al. [9]
3	messenger RNA (mRNA) expression profiles 89 samples	16063 mRNAs	Lu et al. [9]

From the original datasets we analyze a set of 121 miRNAs and 801 mRNAs; 121 miRNAs are overlapping of miRNAs in the dataset 1 and the dataset 2; 801 mRNAs are overlapping of mRNAs in the dataset 1 and the dataset 3, the binding score (i.e. PicTar's score) of all interactions between miRNAs and mRNAs are not less than 1.0.

ISSN: 1471-2105