From: CAR: contig assembly of prokaryotic draft genomes using rearrangements
Tool | Closest reference | Top 10 | Top 20 |
---|---|---|---|
CAR (PROmer) | 63.73 (74.68) | 50.67 (58.82) | 37.81 (34.88) |
SIS (PROmer) | 61.51 (73.85) | 49.81 (55.08) | 37.00 (33.78) |
Mauve Aligner | 60.57 (72.30) | 46.09 (45.07) | 32.54 (22.62) |
CAR (NUCmer) | 57.87 (76.06) | 44.30 (44.23) | 29.19 (12.16) |
SIS (NUCmer) | 56.95 (74.68) | 44.21 (47.43) | 28.81 (10.60) |
r2cat | 59.21 (71.69) | 41.63 (36.84) | 28.85 (19.48) |
OSLay | 49.36 (68.09) | 35.71 (13.85) | 21.72 (0.52) |
fillScaffolds (NUCmer) | 48.47 (61.49) | 33.07 (16.28) | 20.81 (5.26) |
CONTIGuator | 47.33 (60.06) | 32.87 (17.95) | 19.54 (0.44) |
fillScaffolds (PROmer) | 43.59 (42.91) | 31.08 (16.95) | 19.99 (7.04) |
Projector2 | 47.54 (51.58) | 31.07 (20.10) | 20.06 (7.09) |
ABACAS | 27.48 (8.15) | 21.43 (0.12) | 11.41 (0.00) |