From: CHEXVIS: a tool for molecular channel extraction and visualization
 | CHEXVIS | MOLE | CAVER | MOLAXIS | POREWALKER |
---|---|---|---|---|---|
Computation of channels leading to internal molecular sites | Yes | Yes | Yes | Yes | No |
Automatic suggestion of internal sites using CSA | Yes | Yes | Yes | No | No |
Channels to multiple internal sites | Yes | Yes | Yes | No | No |
Filtering of similar channels | No | Yes | Yes | No | No |
Computation of pores | Yes | Yes | No | Limited | Only transmembrane pores |
Computation of transmembrane pores | Yes | No | No | Limited | Yes |
Multiple transmembrane pores | Yes | No | No | No | No |
Ranking of pores | Yes | No | No | No | Not applicable |
Computation of physico-chemical properties | Yes | Yes | No | No | No |
Interactive visualization of physico-chemical properties | Yes | No | No | No | No |
Conservation profile | Yes | No | No | No | No |
User Interface | Web-server | Web-server and GUI | GUI | Web-server | Web-server |
Interactive visualization of channels | Yes | Yes | Yes | No | No |
Good default parameters | Yes | Yes | Yes | Limited | Yes |
Computation speed | Reasonable | Fast | Reasonable | Reasonable | Slow |
PyMOL export | Yes | Yes | Yes | No | No |
PyMOL plugin | No | Yes | Yes | No | No |