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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Equalizer reduces SNP bias in Affymetrix microarrays

Fig. 3

MaskBAD scores for probes kept or excluded by equalizer. a,b Histograms of maskBAD scores for probes that (a) intersect a SNP and (b) do not intersect a SNP in either FVB/N or SPRET/Ei genomes. c Number of probes in probesets expressed above background levels selected at maskBAD quality scores ranging from 0 to 1, plotted separately for probes with no SNP in the probe (filled circles) and probes with a SNP in the probe (open circles)

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BMC Bioinformatics

ISSN: 1471-2105

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