From: QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles
GAIIx | MiSeq | SNV identified in [12] | |||
---|---|---|---|---|---|
Positiona | Percentageb | P(SNV)c | Percentageb | P(SNV)c | |
406 | nad | nad | 0.09 % | 0.99923 | No |
409 | 0.13 % | 0.00110 | 0.10 % | 0.00517 | No |
410 | 0.35 % | 0.05514 | 0.28 % | 0.60047 | Yes |
411 | 0.13 % | 0.00016 | 0.09 % | 0.00318 | No |
413 | 0.26 % | 0.00482 | 0.14 % | 0.98815 | Yes |
415 | 0.25 % | 0.00207 | 0.16 % | 0.98665 | Yes |
418 | 0.18 % | 0.00011 | 0.09 % | 0.00769 | No |
421 | 0.26 % | 0.04058 | 0.16 % | 0.94675 | Yes |
423 | 0.15 % | 0.00012 | 0.08 % | 0.02083 | No |
425 | nad | nad | 0.07 % | 0.88219 | No |