Fig. 11
From: MS3ALIGN: an efficient molecular surface aligner using the topology of surface curvature
Alignments of the ligand surfaces found by MS3ALIGN and not SURFCOMP for the DHFR dataset. a The best two alignments MTX (green) and WRB (purple). b The best alignment of FOL (light pink) with WRB (purple) is along the two amino groups attached to the aromatic ring in both ligands. c Alignment between MTX (green) and TOP (cyan), where the two amino groups attached to an aromatic ring align