From: A powerful score-based statistical test for group difference in weighted biological networks
Gene | NetDifM | NetDifMpm | VEWDM | Yates’D |
---|---|---|---|---|
PI3K-AKT signaling pathway | ||||
  KRAS | 0.19521 | 0.190 | 0.551 | 0.499 |
  PIK3CA | 0.49654 | 0.531 | 0.531 | 0.891 |
  IRS1 | 0.06622 | 0.066 | 0.031 | 0.207 |
  PDPK1 | 0.05108 | 0.042 | 0.032 | 0.143 |
  AKT1 | 0.13639 | 0.146 | 0.065 | 0.712 |
  MDM2 | 0.03568 | 0.035 | 0.011 | 0.484 |
  TP53 | 0.08385 | 0.083 | 0.136 | 0.102 |
Notch signaling pathway | ||||
  DLL3 | 0.05909 | 0.062 | 0.081 | 0.559 |
  DTX2 | 0.42435 | 0.412 | 0.202 | 0.122 |
  CREBBP | 0.20470 | 0.220 | 0.191 | 0.650 |
  PTCRA | 0.51705 | 0.507 | 0.421 | 0.192 |
  JAG1 | 0.03144 | 0.027 | 0.036 | 0.142 |
  DVL2 | 0.00124 | <0.001 | <0.001 | 0.639 |
  SNW1 | 0.71303 | 0.706 | 0.309 | 0.124 |
  HES1 | 0.01032 | 0.002 | 0.035 | 0.995 |
  RBPJ | 0.00001 | <0.001 | <0.001 | 0.646 |
  NOTCH2 | 0.00014 | <0.001 | <0.001 | 0.095 |
  PSENEN | 0.42405 | 0.435 | 0.102 | 0.032 |
  ADAM17 | 0.00701 | 0.009 | 0.009 | 0.326 |
  NUMB | 0.10758 | 0.098 | 0.065 | 0.100 |
  NCOR2 | 0.00021 | <0.001 | <0.001 | 0.344 |