Table 6 Selected genes from lasso and each bag type (B1, B2, B3) based on biological reasons and PMSE and averaged PMSE over 100 bootstrap samples (B-PMSE) in the test data
| Â | Lasso | Bag type B1 | Bag type B2 | Bag type B3 |
|---|---|---|---|---|
| Â | AK3L1 | ADAMTS2 | ADAMTS2 | RARA |
| Â | CCHCR1 | CCHCR1 | CCHCR1 | CCHCR1 |
| Â | CRYGS | PPARA | PPARA | ESR1 |
| Â | CSRNP3 | RUNX2 | RUNX2 | CSRNP3 |
| Â | FAF1 | FAF1 | FAF1 | BMPR2 |
| Â | FKBP14 | SPTBN1 | SPTBN1 | VDR |
| Â | FLRT2 | PDGFA | PDGFA | FLRT2 |
| Â | KDM4A | SLC44A1 | KDM4A7 | KDM4A |
| Â | LOC642852 | OSTM1 | OSTM1 | LOC642852 |
| Â | MAPK8 | BMP7 | BMP7 | WHAMML1 /// WHAMML2 |
| Â | NF1 | NF1 | NF1 | CSNK1G3 |
| Â | PIAS4 | ESR1 | ESR1 | PIAS4 |
| Â | PLIN5 | PLIN5 | HGF | RHO |
| Â | PPIL2 | BMP5 | BMP5 | SRGAP3 |
| Â | RNF31 | RNF31 | RNF31 | GLP1R G |
| Â | SRR | SMAD3 | SRR | SRR |
| Â | TRPS1 | SFRP1 | SFRP1 | TRPS1 |
| Â | ZMAT3 | ZMAT3 | ZMAT3 | ZMAT3 |
PMSE | 1.900 | 1.009 | 1.086 | 5.810 |
B-PMSE | 1.871 | 1.001 | 1.024 | 5.053 |