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Fig. 4 | BMC Bioinformatics

Fig. 4

From: Identification of expression patterns in the progression of disease stages by integration of transcriptomic data

Fig. 4

Patterns found in the analyses of the expression patterns of a simultaed RNA-seq dataset. The dataset includes RPKM signals for 1000 genes and 18 samples divided in 6 stages. a Outputs of the SOM analysis that identifies 4 main patterns including: 50 genes up-early, 51 up-late, 50 down-early and 50 down-late. In this 201 genes found, only one was a false positive and there are not any false negatives. b Plots of expression distributions of the genes found in each pattern. The plots represent the expression signal distributions (as log2 of the RPKM values +1) of the genes in each of the 4 patterns

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BMC Bioinformatics

ISSN: 1471-2105

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